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Species belonging to selected taxon:

Nicotiana tabacum



ABOUT THIS RECORD

ID: MNEST001616
species: Nicotiana tabacum
miRNA family: MIRf599
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGGGATTACAGGTGTGAGC

miRNA*
TCATTTTTGTATTTTTAGTAG

mismatches: 2
bulges: 0

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pre-miRNA
ACCACATGTGGCTCATTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGCTGACCAGGCGGGTCTTGAACTCTTGACCTCGTGATCCCCCTGCCTCAG
CCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACTCC


dot-bracket secondary structure
.......(((((((((.((((((.((((((((.....((((.........(((((.((((.(((((.(((..........))).))))).))))..))))
))))).....)))))))).)))))).)))))))))......



SIMILARITIES
miRBase hsa-mir-3929: 0.0000000000005

PMRD ptc-miRf10804-akr: 0.00000000000003

microPC no hits
UniProt sp|Q96N38|ZN714_HUMAN: 0.000000000002

RFAM Metazoa_SRP: 5e-38
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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